In this assignment, you will perform an exploratory analysis that will allow you to get a feel for the data and start exploring

 

In this assignment, you will perform an exploratory analysis that will allow you to get a feel for the data and start exploring potential relationships. This may include:

  • Descriptive statistics
  • Histograms
  • Bar charts
  • Heat maps
  • Line graphs
  • Box plots
  • Frequency tables

Once your analysis is complete, you will need to provide a Word document showing and describing the results of your exploratory analysis.

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location date variant num_sequences perc_sequences num_sequences_total
Angola 2020-07-06 Alpha 0 0.0 3
Angola 2020-07-06 B.1.1.277 0 0.0 3
Angola 2020-07-06 B.1.1.302 0 0.0 3
Angola 2020-07-06 B.1.1.519 0 0.0 3
Angola 2020-07-06 B.1.160 0 0.0 3
Angola 2020-07-06 B.1.177 0 0.0 3
Angola 2020-07-06 B.1.221 0 0.0 3
Angola 2020-07-06 B.1.258 0 0.0 3
Angola 2020-07-06 B.1.367 0 0.0 3
Angola 2020-07-06 B.1.620 0 0.0 3
Angola 2020-07-06 Beta 0 0.0 3
Angola 2020-07-06 Delta 0 0.0 3
Angola 2020-07-06 Epsilon 0 0.0 3
Angola 2020-07-06 Eta 0 0.0 3
Angola 2020-07-06 Gamma 0 0.0 3
Angola 2020-07-06 Iota 0 0.0 3
Angola 2020-07-06 Kappa 0 0.0 3
Angola 2020-07-06 Lambda 0 0.0 3
Angola 2020-07-06 Mu 0 0.0 3
Angola 2020-07-06 Omicron 0 0.0 3
Angola 2020-07-06 S:677H.Robin1 0 0.0 3
Angola 2020-07-06 S:677P.Pelican 0 0.0 3
Angola 2020-07-06 others 3 100.0 3
Angola 2020-07-06 non_who 3 100.0 3
Angola 2020-08-31 Alpha 0 0.0 1
Angola 2020-08-31 B.1.1.277 0 0.0 1
Angola 2020-08-31 B.1.1.302 0 0.0 1
Angola 2020-08-31 B.1.1.519 0 0.0 1
Angola 2020-08-31 B.1.160 0 0.0 1
Angola 2020-08-31 B.1.177 0 0.0 1
Angola 2020-08-31 B.1.221 0 0.0 1
Angola 2020-08-31 B.1.258 0 0.0 1
Angola 2020-08-31 B.1.367 0 0.0 1
Angola 2020-08-31 B.1.620 0 0.0 1
Angola 2020-08-31 Beta 1 100.0 1
Angola 2020-08-31 Delta 0 0.0 1
Angola 2020-08-31 Epsilon 0 0.0 1
Angola 2020-08-31 Eta 0 0.0 1
Angola 2020-08-31 Gamma 0 0.0 1
Angola 2020-08-31 Iota 0 0.0 1
Angola 2020-08-31 Kappa 0 0.0 1
Angola 2020-08-31 Lambda 0 0.0 1
Angola 2020-08-31 Mu 0 0.0 1
Angola 2020-08-31 Omicron 0 0.0 1
Angola 2020-08-31 S:677H.Robin1 0 0.0 1
Angola 2020-08-31 S:677P.Pelican 0 0.0 1
Angola 2020-08-31 others 0 0.0 1
Angola 2020-08-31 non_who 0 0.0 1
Angola 2020-09-28 Alpha 0 0.0 10
Angola 2020-09-28 B.1.1.277 0 0.0 10
Angola 2020-09-28 B.1.1.302 0 0.0 10
Angola 2020-09-28 B.1.1.519 0 0.0 10
Angola 2020-09-28 B.1.160 0 0.0 10
Angola 2020-09-28 B.1.177 0 0.0 10
Angola 2020-09-28 B.1.221 0 0.0 10
Angola 2020-09-28 B.1.258 0 0.0 10
Angola 2020-09-28 B.1.367 0 0.0 10
Angola 2020-09-28 B.1.620 0 0.0 10
Angola 2020-09-28 Beta 9 90.0 10
Angola 2020-09-28 Delta 0 0.0 10
Angola 2020-09-28 Epsilon 0 0.0 10
Angola 2020-09-28 Eta 0 0.0 10
Angola 2020-09-28 Gamma 0 0.0 10
Angola 2020-09-28 Iota 0 0.0 10
Angola 2020-09-28 Kappa 0 0.0 10
Angola 2020-09-28 Lambda 0 0.0 10
Angola 2020-09-28 Mu 0 0.0 10
Angola 2020-09-28 Omicron 0 0.0 10
Angola 2020-09-28 S:677H.Robin1 0 0.0 10
Angola 2020-09-28 S:677P.Pelican 0 0.0 10
Angola 2020-09-28 others 1 10.0 10
Angola 2020-09-28 non_who 1 10.0 10
Angola 2020-10-12 Alpha 0 0.0 29
Angola 2020-10-12 B.1.1.277 0 0.0 29
Angola 2020-10-12 B.1.1.302 0 0.0 29
Angola 2020-10-12 B.1.1.519 0 0.0 29
Angola 2020-10-12 B.1.160 0 0.0 29
Angola 2020-10-12 B.1.177 0 0.0 29
Angola 2020-10-12 B.1.221 0 0.0 29
Angola 2020-10-12 B.1.258 0 0.0 29
Angola 2020-10-12 B.1.367 0 0.0 29
Angola 2020-10-12 B.1.620 0 0.0 29
Angola 2020-10-12 Beta 24 82.76 29
Angola 2020-10-12 Delta 0 0.0 29
Angola 2020-10-12 Epsilon 0 0.0 29
Angola 2020-10-12 Eta 0 0.0 29
Angola 2020-10-12 Gamma 0 0.0 29
Angola 2020-10-12 Iota 0 0.0 29
Angola 2020-10-12 Kappa 0 0.0 29
Angola 2020-10-12 Lambda 0 0.0 29
Angola 2020-10-12 Mu 0 0.0 29
Angola 2020-10-12 Omicron 0 0.0 29
Angola 2020-10-12 S:677H.Robin1 0 0.0 29
Angola 2020-10-12 S:677P.Pelican 0 0.0 29
Angola 2020-10-12 others 5 17.24 29
Angola 2020-10-12 non_who 5 17.24 29
Angola 2020-10-26 Alpha 0 0.0 7
Angola 2020-10-26 B.1.1.277 0 0.0 7
Angola 2020-10-26 B.1.1.302 0 0.0 7
Angola 2020-10-26 B.1.1.519 0 0.0 7
Angola 2020-10-26 B.1.160 0 0.0 7
Angola 2020-10-26 B.1.177 0 0.0 7
Angola 2020-10-26 B.1.221 0 0.0 7
Angola 2020-10-26 B.1.258 0 0.0 7
Angola 2020-10-26 B.1.367 0 0.0 7
Angola 2020-10-26 B.1.620 0 0.0 7
Angola 2020-10-26 Beta 7 100.0 7
Angola 2020-10-26 Delta 0 0.0 7
Angola 2020-10-26 Epsilon 0 0.0 7
Angola 2020-10-26 Eta 0 0.0 7
Angola 2020-10-26 Gamma 0 0.0 7
Angola 2020-10-26 Iota 0 0.0 7
Angola 2020-10-26 Kappa 0 0.0 7
Angola 2020-10-26 Lambda 0 0.0 7
Angola 2020-10-26 Mu 0 0.0 7
Angola 2020-10-26 Omicron 0 0.0 7
Angola 2020-10-26 S:677H.Robin1 0 0.0 7
Angola 2020-10-26 S:677P.Pelican 0 0.0 7
Angola 2020-10-26 others 0 0.0 7
Angola 2020-10-26 non_who 0 0.0 7
Angola 2020-12-07 Alpha 0 0.0 6
Angola 2020-12-07 B.1.1.277 0 0.0 6
Angola 2020-12-07 B.1.1.302 0 0.0 6
Angola 2020-12-07 B.1.1.519 0 0.0 6
Angola 2020-12-07 B.1.160 0 0.0 6
Angola 2020-12-07 B.1.177 0 0.0 6
Angola 2020-12-07 B.1.221 0 0.0 6
Angola 2020-12-07 B.1.258 0 0.0 6
Angola 2020-12-07 B.1.367 0 0.0 6
Angola 2020-12-07 B.1.620 0 0.0 6
Angola 2020-12-07 Beta 6 100.0 6
Angola 2020-12-07 Delta 0 0.0 6
Angola 2020-12-07 Epsilon 0 0.0 6
Angola 2020-12-07 Eta 0 0.0 6
Angola 2020-12-07 Gamma 0 0.0 6
Angola 2020-12-07 Iota 0 0.0 6
Angola 2020-12-07 Kappa 0 0.0 6
Angola 2020-12-07 Lambda 0 0.0 6
Angola 2020-12-07 Mu 0 0.0 6
Angola 2020-12-07 Omicron 0 0.0 6
Angola 2020-12-07 S:677H.Robin1 0 0.0 6
Angola 2020-12-07 S:677P.Pelican 0 0.0 6
Angola 2020-12-07 others 0 0.0 6
Angola 2020-12-07 non_who 0 0.0 6
Angola 2020-12-21 Alpha 0 0.0 93
Angola 2020-12-21 B.1.1.277 0 0.0 93
Angola 2020-12-21 B.1.1.302 0 0.0 93
Angola 2020-12-21 B.1.1.519 0 0.0 93
Angola 2020-12-21 B.1.160 0 0.0 93
Angola 2020-12-21 B.1.177 0 0.0 93
Angola 2020-12-21 B.1.221 0 0.0 93
Angola 2020-12-21 B.1.258 0 0.0 93
Angola 2020-12-21 B.1.367 0 0.0 93
Angola 2020-12-21 B.1.620 0 0.0 93
Angola 2020-12-21 Beta 69 74.19 93
Angola 2020-12-21 Delta 0 0.0 93
Angola 2020-12-21 Epsilon 0 0.0 93
Angola 2020-12-21 Eta 1 1.08 93
Angola 2020-12-21 Gamma 0 0.0 93
Angola 2020-12-21 Iota 0 0.0 93
Angola 2020-12-21 Kappa 0 0.0 93
Angola 2020-12-21 Lambda 0 0.0 93
Angola 2020-12-21 Mu 0 0.0 93
Angola 2020-12-21 Omicron 0 0.0 93
Angola 2020-12-21 S:677H.Robin1 0 0.0 93
Angola 2020-12-21 S:677P.Pelican 0 0.0 93
Angola 2020-12-21 others 23 24.73 93
Angola 2020-12-21 non_who 23 24.73 93
Angola 2021-01-04 Alpha 0 0.0 5
Angola 2021-01-04 B.1.1.277 0 0.0 5
Angola 2021-01-04 B.1.1.302 0 0.0 5
Angola 2021-01-04 B.1.1.519 0 0.0 5
Angola 2021-01-04 B.1.160 0 0.0 5
Angola 2021-01-04 B.1.177 0 0.0 5
Angola 2021-01-04 B.1.221 0 0.0 5
Angola 2021-01-04 B.1.258 0 0.0 5
Angola 2021-01-04 B.1.367 0 0.0 5
Angola 2021-01-04 B.1.620 0 0.0 5
Angola 2021-01-04 Beta 0 0.0 5
Angola 2021-01-04 Delta 0 0.0 5
Angola 2021-01-04 Epsilon 0 0.0 5
Angola 2021-01-04 Eta 0 0.0 5
Angola 2021-01-04 Gamma 0 0.0 5
Angola 2021-01-04 Iota 0 0.0 5
Angola 2021-01-04 Kappa 0 0.0 5
Angola 2021-01-04 Lambda 0 0.0 5
Angola 2021-01-04 Mu 0 0.0 5
Angola 2021-01-04 Omicron 0 0.0 5
Angola 2021-01-04 S:677H.Robin1 0 0.0 5
Angola 2021-01-04 S:677P.Pelican 0 0.0 5
Angola 2021-01-04 others 5 100.0 5
Angola 2021-01-04 non_who 5 100.0 5
Angola 2021-01-11 Alpha 0 0.0 16
Angola 2021-01-11 B.1.1.277 0 0.0 16
Angola 2021-01-11 B.1.1.302 0 0.0 16
Angola 2021-01-11 B.1.1.519 0 0.0 16
Angola 2021-01-11 B.1.160 0 0.0 16
Angola 2021-01-11 B.1.177 0 0.0 16
Angola 2021-01-11 B.1.221 0 0.0 16
Angola 2021-01-11 B.1.258 0 0.0 16
Angola 2021-01-11 B.1.367 0 0.0 16
Angola 2021-01-11 B.1.620 0 0.0 16
Angola 2021-01-11 Beta 1 6.25 16
Angola 2021-01-11 Delta 0 0.0 16
Angola 2021-01-11 Epsilon 0 0.0 16
Angola 2021-01-11 Eta 0 0.0 16
Angola 2021-01-11 Gamma 0 0.0 16
Angola 2021-01-11 Iota 0 0.0 16
Angola 2021-01-11 Kappa 0 0.0 16
Angola 2021-01-11 Lambda 0 0.0 16
Angola 2021-01-11 Mu 0 0.0 16
Angola 2021-01-11 Omicron 0 0.0 16
Angola 2021-01-11 S:677H.Robin1 0 0.0 16
Angola 2021-01-11 S:677P.Pelican 0 0.0 16
Angola 2021-01-11 others 15 93.75 16
Angola 2021-01-11 non_who 15 93.75 16
Angola 2021-01-25 Alpha 3 5.77 52
Angola 2021-01-25 B.1.1.277 0 0.0 52
Angola 2021-01-25 B.1.1.302 0 0.0 52
Angola 2021-01-25 B.1.1.519 0 0.0 52
Angola 2021-01-25 B.1.160 1 1.92 52
Angola 2021-01-25 B.1.177 2 3.85 52
Angola 2021-01-25 B.1.221 0 0.0 52
Angola 2021-01-25 B.1.258 1 1.92 52
Angola 2021-01-25 B.1.367 0 0.0 52
Angola 2021-01-25 B.1.620 0 0.0 52
Angola 2021-01-25 Beta 2 3.85 52
Angola 2021-01-25 Delta 0 0.0 52
Angola 2021-01-25 Epsilon 0 0.0 52
Angola 2021-01-25 Eta 0 0.0 52
Angola 2021-01-25 Gamma 0 0.0 52
Angola 2021-01-25 Iota 0 0.0 52
Angola 2021-01-25 Kappa 0 0.0 52
Angola 2021-01-25 Lambda 0 0.0 52
Angola 2021-01-25 Mu 0 0.0 52
Angola 2021-01-25 Omicron 0 0.0 52
Angola 2021-01-25 S:677H.Robin1 0 0.0 52
Angola 2021-01-25 S:677P.Pelican 0 0.0 52
Angola 2021-01-25 others 43 82.69 52
Angola 2021-01-25 non_who 47 90.38 52
Angola 2021-02-08 Alpha 4 9.52 42
Angola 2021-02-08 B.1.1.277 0 0.0 42
Angola 2021-02-08 B.1.1.302 0 0.0 42
Angola 2021-02-08 B.1.1.519 0 0.0 42
Angola 2021-02-08 B.1.160 1 2.38 42
Angola 2021-02-08 B.1.177 0 0.0 42
Angola 2021-02-08 B.1.221 0 0.0 42
Angola 2021-02-08 B.1.258 0 0.0 42
Angola 2021-02-08 B.1.367 0 0.0 42
Angola 2021-02-08 B.1.620 0 0.0 42
Angola 2021-02-08 Beta 12 28.57 42
Angola 2021-02-08 Delta 0 0.0 42
Angola 2021-02-08 Epsilon 0 0.0 42
Angola 2021-02-08 Eta 0 0.0 42
Angola 2021-02-08 Gamma 0 0.0 42
Angola 2021-02-08 Iota 0 0.0 42
Angola 2021-02-08 Kappa 0 0.0 42
Angola 2021-02-08 Lambda 0 0.0 42
Angola 2021-02-08 Mu 0 0.0 42
Angola 2021-02-08 Omicron 0 0.0 42
Angola 2021-02-08 S:677H.Robin1 0 0.0 42
Angola 2021-02-08 S:677P.Pelican 0 0.0 42
Angola 2021-02-08 others 25 59.53 42
Angola 2021-02-08 non_who 26 61.91 42
Angola 2021-02-22 Alpha 1 2.56 39
Angola 2021-02-22 B.1.1.277 0 0.0 39
Angola 2021-02-22 B.1.1.302 0 0.0 39
Angola 2021-02-22 B.1.1.519 0 0.0 39
Angola 2021-02-22 B.1.160 1 2.56 39
Angola 2021-02-22 B.1.177 1 2.56 39
Angola 2021-02-22 B.1.221 0 0.0 39
Angola 2021-02-22 B.1.258 0 0.0 39
Angola 2021-02-22 B.1.367 0 0.0 39
Angola 2021-02-22 B.1.620 0 0.0 39
Angola 2021-02-22 Beta 16 41.03 39
Angola 2021-02-22 Delta 0 0.0 39
Angola 2021-02-22 Epsilon 0 0.0 39
Angola 2021-02-22 Eta 0 0.0 39
Angola 2021-02-22 Gamma 0 0.0 39
Angola 2021-02-22 Iota 0 0.0 39
Angola 2021-02-22 Kappa 0 0.0 39
Angola 2021-02-22 Lambda 0 0.0 39
Angola 2021-02-22 Mu 0 0.0 39
Angola 2021-02-22 Omicron 0 0.0 39
Angola 2021-02-22 S:677H.Robin1 0 0.0 39
Angola 2021-02-22 S:677P.Pelican 0 0.0 39
Angola 2021-02-22 others 20 51.29 39
Angola 2021-02-22 non_who 22 56.41 39
Angola 2021-03-08 Alpha 7 6.19 113
Angola 2021-03-08 B.1.1.277 0 0.0 113
Angola 2021-03-08 B.1.1.302 0 0.0 113
Angola 2021-03-08 B.1.1.519 0 0.0 113
Angola 2021-03-08 B.1.160 0 0.0 113
Angola 2021-03-08 B.1.177 1 0.88 113
Angola 2021-03-08 B.1.221 0 0.0 113
Angola 2021-03-08 B.1.258 0 0.0 113
Angola 2021-03-08 B.1.367 0 0.0 113
Angola 2021-03-08 B.1.620 0 0.0 113
Angola 2021-03-08 Beta 69 61.06 113
Angola 2021-03-08 Delta 0 0.0 113
Angola 2021-03-08 Epsilon 0 0.0 113
Angola 2021-03-08 Eta 0 0.0 113
Angola 2021-03-08 Gamma 0 0.0 113
Angola 2021-03-08 Iota 0 0.0 113
Angola 2021-03-08 Kappa 0 0.0 113
Angola 2021-03-08 Lambda 0 0.0 113
Angola 2021-03-08 Mu 0 0.0 113
Angola 2021-03-08 Omicron 0 0.0 113
Angola 2021-03-08 S:677H.Robin1 0 0.0 113
Angola 2021-03-08 S:677P.Pelican 0 0.0 113
Angola 2021-03-08 others 36 31.87 113
Angola 2021-03-08 non_who 37 32.75 113
Angola 2021-03-22 Alpha 12 9.92 121
Angola 2021-03-22 B.1.1.277 0 0.0 121
Angola 2021-03-22 B.1.1.302 0 0.0 121
Angola 2021-03-22 B.1.1.519 0 0.0 121
Angola 2021-03-22 B.1.160 0 0.0 121
Angola 2021-03-22 B.1.177 0 0.0 121
Angola 2021-03-22 B.1.221 0 0.0 121
Angola 2021-03-22 B.1.258 0 0.0 121
Angola 2021-03-22 B.1.367 0 0.0 121
Angola 2021-03-22 B.1.620 0 0.0 121
Angola 2021-03-22 Beta 87 71.9 121
Angola 2021-03-22 Delta 0 0.0 121
Angola 2021-03-22 Epsilon 0 0.0 121
Angola 2021-03-22 Eta 1 0.83 121
Angola 2021-03-22 Gamma 0 0.0